4922 Peptidases_S8_Kp43_proteaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4922	chr_4	Peptidases_S8_Kp43_protease	2286594	2291378	+	Peptidases_S8_Kp43_protease

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452261	Thaps4922.3, Thaps4922.5, Thaps4922.2, Thaps4922.4, Thaps4922.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0282	0.29	12000 20000

Most Highly Correlated Transcripts

11150 hypothetical protein 0.9537	bd463 (bd463) Aa_trans superfamily 0.9359	bd1081 (bd1081) NA 0.9312	bd439 (bd439) POLBc_alpha 0.9214	9432 SCP superfamily 0.9203	bd1173 (bd1173) S_TKc 0.9145
3424 hypothetical protein 0.9098	bd950 (bd950) NA 0.9097	23757 hypothetical protein 0.9094	11548 MDR8 0.9093

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidases_S8_Kp43_protease		Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 or...	cl10459	313.112	1.32E-96	617 - 921	specific	173791
Peptidases_S8_S53 superfamily		Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin)...	-	313.112	1.32E-96	617 - 921	superfamily	263972
Peptidase_S8		Subtilase family; Subtilases are a family of serine proteases. They appear to have independently...	-	127.103	1.07E-31	626 - 893	multi-dom	249571

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004289 GO:0006508 -

Add comment

Log in to post comments