9432 SCP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9432 chr_13 SCP superfamily 420586 421720 - SCP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453026 Thaps9432.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0097

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0282
 0.29

Most Highly Correlated Transcripts

7900

SCP superfamily
0.9468

11150

hypothetical protein
0.9342

4922

Peptidases_S8_Kp43_protease
0.9203

25838

hypothetical protein
0.9197

23757

hypothetical protein
0.9183

3424

hypothetical protein
0.9149

20891

Cyt_b561_FRRS1_like
0.9143

5439

hypothetical protein
0.9098

11138

hypothetical protein
0.9089

11499

hypothetical protein
0.8973

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SCP superfamily SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family... - 61.4571 9.92E-12 198 - 340 superfamily 260208

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005576 -

GO:0005576

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

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