11947 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11947 chr_22 hypothetical protein 982666 984753 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7448246 Thaps11947.2, Thaps11947.3, Thaps11947.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Most Highly Correlated Transcripts

bd460

(bd460) folC
0.771

24035

Peptidase_C19 superfamily
0.7636

13427

AarF
0.7591

6592

TroA-like superfamily
0.7573

24639

EH
0.7541

3323

hypothetical protein
0.7506

23544

hypothetical protein
0.741

263036

HP_PGM_like
0.7384

25248

MATE_like superfamily
0.7356

22940

ARGLU
0.7326

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 301229 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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