Organism : Geobacter sulfurreducens | Module List :
glycosyl transferase, group 1 family protein (VIMSS)
Functional Annotations (2)
|biosynthetic process||go/ biological_process|
Regulation information for GSU0634(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for GSU0634
|biosynthetic process||go/ biological_process|
Module neighborhood information for GSU0634
|Gene||Common Name||Description||Module membership|
|GSU0009||GSU0009||sensory box histidine kinase (VIMSS)||217, 249|
|GSU0148||alaS||alanyl-tRNA synthetase (NCBI)||30, 204|
|GSU0273||GSU0273||radical SAM domain protein (NCBI)||249, 278|
|GSU0310||GSU0310||conserved hypothetical protein (VIMSS)||217, 249|
|GSU0634||GSU0634||glycosyl transferase, group 1 family protein (VIMSS)||204, 249|
|GSU0999||GSU0999||acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase, putative (NCBI)||204, 332|
|GSU1132||ftsY||cell division protein FtsY (NCBI)||204, 332|
|GSU1136||GSU1136||5-formyltetrahydrofolate cyclo-ligase family protein (VIMSS)||249, 265|
|GSU1188||GSU1188||rhomboid family protein (VIMSS)||204, 224|
|GSU1243||coaD||pantetheine-phosphate adenylyltransferase (NCBI)||143, 204|
|GSU1260||GSU1260||ABC transporter, permease protein (NCBI)||144, 204|
|GSU1276||carB||carbamoyl-phosphate synthase, large subunit (NCBI)||132, 249|
|GSU1390||GSU1390||DNA-binding protein (NCBI)||88, 249|
|GSU1391||GSU1391||Fic family protein (NCBI)||249, 278|
|GSU1392||GSU1392||CRISPR-associated protein Cas1 (NCBI)||249, 336|
|GSU1393||GSU1393||CRISPR-associated protein, CT1978 family (NCBI)||163, 249|
|GSU1438||GSU1438||conserved hypothetical protein (VIMSS)||204, 306|
|GSU1462||GSU1462||RNA methyltransferase, TrmH family, group 3 (VIMSS)||204, 329|
|GSU1481||GSU1481||multidrug resistance protein, putative (VIMSS)||131, 204|
|GSU1484||GSU1484||soluble lytic murein transglycosylase, putative (VIMSS)||204, 222|
|GSU1679||GSU1679||hypothetical protein (VIMSS)||51, 249|
|GSU1700||maeB||NADP-dependent malic enzyme (NCBI)||204, 329|
|GSU1701||GSU1701||HIT family protein (VIMSS)||204, 329|
|GSU1702||GSU1702||ROK family protein (VIMSS)||204, 295|
|GSU1703||pfk||6-phosphofructokinase (NCBI)||204, 300|
|GSU1753||GSU1753||lysyl-tRNA synthetase-related protein (NCBI)||163, 249|
|GSU1758||purM||phosphoribosylformylglycinamidine cyclo-ligase (VIMSS)||30, 249|
|GSU1829||GSU1829||hypothetical protein (NCBI)||204, 332|
|GSU1864||ksgA||dimethyladenosine transferase (NCBI)||199, 249|
|GSU1865||gcp||metalloendopeptidase, putative, glycoprotease family (NCBI)||199, 249|
|GSU1866||GSU1866||phoH family protein (VIMSS)||249, 333|
|GSU1868||GSU1868||aminotransferase, class V (VIMSS)||249, 308|
|GSU1869||GSU1869||lipoprotein, putative (VIMSS)||199, 249|
|GSU2046||GSU2046||response regulator (NCBI)||39, 204|
|GSU2093||GSU2093||ABC transporter, ATP-binding protein (VIMSS)||217, 249|
|GSU2110||GSU2110||hypothetical protein (VIMSS)||102, 249|
|GSU2111||GSU2111||hypothetical protein (VIMSS)||102, 249|
|GSU2253||GSU2253||glycosyl transferase, group 1 family protein (VIMSS)||204, 277|
|GSU2264||lpxA||acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase (NCBI)||249, 277|
|GSU2889||GSU2889||hypothetical protein (VIMSS)||68, 249|
|GSU3064||ftsA||cell division protein FtsA (NCBI)||249, 265|
|GSU3346||GSU3346||potassium uptake protein, Kup system (VIMSS)||249, 295|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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