Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP1699(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP1699
|Gene||Common Name||Description||Module membership|
|MMP0003||korA||2-oxoglutarate ferredoxin oxidoreductase subunit alpha||27, 77|
|MMP0006||3-dehydroquinate synthase||27, 77|
|MMP0062||50S ribosomal protein L31e||61, 77, 96, 128, 138|
|MMP0075||abortive infection protein||96, 136|
|MMP0087||hmgA||hydroxymethylglutaryl-coenzyme A reductase:3-hydroxy-3-methylglutaryl coenzyme A reductase||39, 136|
|MMP0088||hemA||glutamyl-tRNA reductase||39, 136|
|MMP0103||pyridoxal biosynthesis lyase PdxS||8, 27, 77|
|MMP0127||hmd||H(2)-dependent methylenetetrahydromethanopterin dehydrogenase||8, 77|
|MMP0135||thrC||threonine synthase||27, 77|
|MMP0136||leuD||3-isopropylmalate dehydratase small subunit||27, 77|
|MMP0164||cbiX(s)||sirohydrochlorin cobaltochelatase||39, 136|
|MMP0249||rpl37ae||50S ribosomal protein L37Ae||61, 77|
|MMP0250||putative RNA-associated protein||61, 77|
|MMP0261||DNA directed RNA polymerase subunit L||27, 77|
|MMP0317||hypothetical protein MMP0317||77, 96|
|MMP0370||hypothetical protein MMP0370||77, 96|
|MMP0391||aspC||aspartate aminotransferase||77, 78|
|MMP0396||eno||phosphopyruvate hydratase||77, 78|
|MMP0429||hypothetical protein MMP0429||64, 136|
|MMP0553||argF||ornithine carbamoyltransferase||27, 77|
|MMP0644||cation diffusion facilitator family transporter||39, 136|
|MMP0645||mdh||malate dehydrogenase||8, 39, 136|
|MMP0646||hypothetical protein MMP0646||39, 136|
|MMP0654||ilvC||ketol-acid reductoisomerase||27, 77|
|MMP0874||SAM-binding motif-containing protein||39, 136|
|MMP0875||slpB||S layer protein||39, 136|
|MMP0887||stress responsive alpha-beta barrel domain-containing protein||40, 136|
|MMP0888||cobalt transport protein CbiN||39, 136|
|MMP0889||cobalt transport protein CbiM||39, 136|
|MMP0917||dapF||diaminopimelate epimerase||107, 136|
|MMP0965||formylmethanofuran dehydrogenase subunit E-like protein||8, 39, 136|
|MMP1013||carB||carbamoyl-phosphate synthase large subunit||77, 96|
|MMP1035||hypothetical protein MMP1035||77, 136|
|MMP1036||hypothetical protein MMP1036||77, 136|
|MMP1149||leuC||3-isopropylmalate dehydratase large subunit||27, 77|
|MMP1175||hypothetical protein MMP1175||14, 136|
|MMP1176||putative iron transport system substrate-binding protein, N-term half||39, 136|
|MMP1177||putative iron transport system substrate-binding protein, C-term half||39, 136|
|MMP1178||periplasmic binding protein||39, 136|
|MMP1181||iron transport system binding protein||39, 136|
|MMP1182||transport system permease||39, 136|
|MMP1183||iron ABC transporter ATPase subunit||39, 136|
|MMP1310||purO||IMP cyclohydrolase||27, 77|
|MMP1497||hypothetical protein MMP1497||27, 77|
|MMP1498||hypothetical protein MMP1498||27, 77|
|MMP1510||gatA||aspartyl/glutamyl-tRNA amidotransferase subunit A||27, 77|
|MMP1515||hsp60||chaperonin GroEL||77, 96|
|MMP1588||serA||D-3-phosphoglycerate dehydrogenase||7, 8, 27, 77|
|MMP1593||hypothetical protein MMP1593||27, 77|
|MMP1646||hypothetical protein MMP1646||96, 136|
|MMP1699||hypothetical protein MMP1699||77, 136|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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