Module 83 Residual: 0.52

Title Bicluster Model Residual Score
bicluster_0083 v02 0.52 -16.97
Displaying 1 - 16 of 16
Rv0530 RD1 region associated protein Rv3876

Details for Rv0530 - RD1 region associated protein Rv3876

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0530

Tuberculist Genomic Region

Rv1538c L-asparaginase (EC 3.5.1.1)

Details for Rv1538c - L-asparaginase (EC 3.5.1.1)

GO Terms: GO:0004067

PATRIC Pathways: Nitrogen metabolism, Cyanoamino acid metabolism, Alanine, aspartate and glutamate metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1538c

Tuberculist Genomic Region

Rv2474c

Details for Rv2474c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.19 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2474c

Tuberculist Genomic Region

Rv2475c

Details for Rv2475c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.43 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2475c

Tuberculist Genomic Region

Rv2476c NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form

Details for Rv2476c - NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form

GO Terms: GO:0004354, GO:0005515, GO:0005618, GO:0005829, GO:0005886

PATRIC Pathways: Nitrogen metabolism, Alanine, aspartate and glutamate metabolism, Arginine and proline metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2476c

Tuberculist Genomic Region

Rv2857c Short-chain dehydrogenase/reductase in hypothetical Actinobacterial gene cluster

Details for Rv2857c - Short-chain dehydrogenase/reductase in hypothetical Actinobacterial gene cluster

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.17 | In vitro Essential: NA | In vivo Essential: 0.32

Go to Gene Page: Rv2857c

Tuberculist Genomic Region

Rv2858c Aldehyde dehydrogenase in hypothetical Actinobacterial gene cluster

Details for Rv2858c - Aldehyde dehydrogenase in hypothetical Actinobacterial gene cluster

GO Terms: GO:0004029, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.11 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2858c

Tuberculist Genomic Region

Rv2859c COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster

Details for Rv2859c - COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster

GO Terms: GO:0004049

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2859c

Tuberculist Genomic Region

Rv2860c

Details for Rv2860c -

GO Terms: GO:0004356, GO:0005886, GO:0051260

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2860c

Tuberculist Genomic Region

Rv3264c D-glycero-D-manno-heptose 1-phosphate guanosyltransferase

Details for Rv3264c - D-glycero-D-manno-heptose 1-phosphate guanosyltransferase

GO Terms: GO:0009058, GO:0016779, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv3264c

Tuberculist Genomic Region

Rv3265c dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL

Details for Rv3265c - dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL

GO Terms: GO:0005886, GO:0016758, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv3265c

Tuberculist Genomic Region

Rv3266c dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)

Details for Rv3266c - dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)

GO Terms: GO:0008831

PATRIC Pathways: Streptomycin biosynthesis, Polyketide sugar unit biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3266c

Tuberculist Genomic Region

Rv3267 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)

Details for Rv3267 - Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily A1 (as in PMID19099556)

GO Terms: GO:0005576, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.10 | In vivo Essential: NA

Go to Gene Page: Rv3267

Tuberculist Genomic Region

Rv3268

Details for Rv3268 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3268

Tuberculist Genomic Region

Rv3604c Possible membrane protein

Details for Rv3604c - Possible membrane protein

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv3604c

Tuberculist Genomic Region

Rv1173 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 / 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2

Details for Rv1173 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 / 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2

GO Terms: GO:0005886, GO:0009108, GO:0051409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1173

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 240 e-value: 440
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0006541 glutamine metabolic process
Displaying 1 - 19 of 19
GO:0004067 |

asparaginase activity

GO:0004354 |

glutamate dehydrogenase (NADP+) activity

GO:0005515 |

protein binding

GO:0005618 |

cell wall

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0004029 |

aldehyde dehydrogenase (NAD) activity

GO:0004049 |

anthranilate synthase activity

GO:0004356 |

glutamate-ammonia ligase activity

GO:0051260 |

protein homooligomerization

GO:0009058 |

biosynthetic process

GO:0016779 |

nucleotidyltransferase activity

GO:0040007 |

growth

GO:0016758 |

transferase activity, transferring hexosyl groups

GO:0008831 |

dTDP-4-dehydrorhamnose reductase activity

GO:0005576 |

extracellular region

GO:0009108 |

coenzyme biosynthetic process

GO:0051409 |

response to nitrosative stress