Module 126 Residual: 0.51

Title Bicluster Model Residual Score
bicluster_0126 v02 0.51 -6.66
Displaying 1 - 17 of 17
Rv0072 Glutamine-transport transmembrane protein ABC transporter

Details for Rv0072 - Glutamine-transport transmembrane protein ABC transporter

GO Terms: GO:0005886, GO:0005887, GO:0009405

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.66 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0072

Tuberculist Genomic Region

Rv0073 Glutamine-transport ATP-binding protein ABC transporter

Details for Rv0073 - Glutamine-transport ATP-binding protein ABC transporter

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0073

Tuberculist Genomic Region

Rv0346c L-asparagine permease

Details for Rv0346c - L-asparagine permease

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.37 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0346c

Tuberculist Genomic Region

Rv0433 Carboxylate-amine ligase

Details for Rv0433 - Carboxylate-amine ligase

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0433

Tuberculist Genomic Region

Rv0497 Possible membrane protein

Details for Rv0497 - Possible membrane protein

GO Terms: GO:0044119

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.02 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0497

Tuberculist Genomic Region

Rv0719 LSU ribosomal protein L6p (L9e)

Details for Rv0719 - LSU ribosomal protein L6p (L9e)

GO Terms: GO:0006412, GO:0005622, GO:0005840, GO:0003735, GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv0719

Tuberculist Genomic Region

Rv1436 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)

Details for Rv1436 - NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)

GO Terms: GO:0004365, GO:0005576, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Glycolysis / Gluconeogenesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.19 | In vivo Essential: NA

Go to Gene Page: Rv1436

Tuberculist Genomic Region

Rv1437 Phosphoglycerate kinase (EC 2.7.2.3)

Details for Rv1437 - Phosphoglycerate kinase (EC 2.7.2.3)

GO Terms: GO:0004618, GO:0005576, GO:0005886, GO:0040007

PATRIC Pathways: Glycolysis / Gluconeogenesis, Carbon fixation in photosynthetic organisms

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1437

Tuberculist Genomic Region

Rv1438 Triosephosphate isomerase (EC 5.3.1.1)

Details for Rv1438 - Triosephosphate isomerase (EC 5.3.1.1)

GO Terms: GO:0004807, GO:0004807, GO:0005576, GO:0005829, GO:0005886, GO:0040007, GO:0042803

PATRIC Pathways: Glycolysis / Gluconeogenesis, Carbon fixation in photosynthetic organisms, Inositol phosphate metabolism, Fructose and mannose metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv1438

Tuberculist Genomic Region

Rv1980c Immunogenic protein MPT64/MPB64 precursor

Details for Rv1980c - Immunogenic protein MPT64/MPB64 precursor

GO Terms: GO:0005576, GO:0009267

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1980c

Tuberculist Genomic Region

Rv3920c RNA-binding protein Jag

Details for Rv3920c - RNA-binding protein Jag

GO Terms: GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.86 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3920c

Tuberculist Genomic Region

Rv3921c Inner membrane protein translocase component YidC, long form

Details for Rv3921c - Inner membrane protein translocase component YidC, long form

GO Terms: GO:0005887, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.13 | In vivo Essential: NA

Go to Gene Page: Rv3921c

Tuberculist Genomic Region

Rv0431 Tuberculin related peptide

Details for Rv0431 - Tuberculin related peptide

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0431

Tuberculist Genomic Region

Rv1241

Details for Rv1241 -

GO Terms: GO:0045927

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.39 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1241

Tuberculist Genomic Region

Rv2953 Trans-acting enoyl reductase

Details for Rv2953 - Trans-acting enoyl reductase

GO Terms: GO:0005886, GO:0009247, GO:0071766

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.34 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2953

Tuberculist Genomic Region

Rv2956 gsc

Details for Rv2956 - gsc

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.02 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2956

Tuberculist Genomic Region

Rv3646c DNA topoisomerase I (EC 5.99.1.2)

Details for Rv3646c - DNA topoisomerase I (EC 5.99.1.2)

GO Terms: GO:0003917, GO:0000287, GO:0003917, GO:0005618, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv3646c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 2.8 e-value: 8500
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0006096 glycolysis
Displaying 1 - 23 of 23
GO:0005886 |

plasma membrane

GO:0005887 |

integral to plasma membrane

GO:0009405 |

pathogenesis

GO:0044119 |

growth of symbiont in host cell

GO:0006412 |

translation

GO:0005622 |

intracellular

GO:0005840 |

ribosome

GO:0003735 |

structural constituent of ribosome

GO:0005618 |

cell wall

GO:0040007 |

growth

GO:0004365 |

glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0004618 |

phosphoglycerate kinase activity

GO:0004807 |

triose-phosphate isomerase activity

GO:0042803 |

protein homodimerization activity

GO:0009267 |

cellular response to starvation

GO:0045927 |

positive regulation of growth

GO:0009247 |

glycolipid biosynthetic process

GO:0071766 |

Actinobacterium-type cell wall biogenesis

GO:0003917 |

DNA topoisomerase type I activity

GO:0000287 |

magnesium ion binding