Regulatory Modules
Displaying 21 - 30 of 162Methanococcus maripaludis S2
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
mmp-bicluster_0023 | 0.0000034 | 37 | 0.32 | MMP0035, MMP0069, MMP0321, MMP0322, MMP0476, MMP0477, MMP0496, MMP0528, MMP0563, MMP0742, MMP0799, MMP1019, MMP1224, MMP1329, MMP1553, MMP0113, MMP0115, MMP0997 | response to stress, glutamine family amino acid biosynthetic..., dicarboxylic acid metabolic process, glutamine family amino acid metabolic pr... |
mmp-bicluster_0024 | 0.00047 | 4300 | 0.43 | MMP0076, MMP0134, MMP0419, MMP0637, MMP0655, MMP0679, MMP0715, MMP0814, MMP0815, MMP0880, MMP1270, MMP1537, MMP1538, MMP1540, MMP1541, MMP1590, MMP0319, MMP0340, MMP0702, MMP0713, MMP0714, MMP0953, MMP1017, MMP1363, MMP1659 | cellular aromatic compound metabolic pro..., small molecule metabolic process, organic cyclic compound metabolic proces..., single-organism metabolic process, pyrimidine-containing compound metabolic... |
mmp-bicluster_0025 | 5.9 | 990 | 0.31 | MMP0026, MMP0133, MMP0243, MMP0284, MMP0315, MMP0316, MMP0412, MMP0588, MMP0610, MMP0878, MMP0921, MMP0953, MMP1011, MMP1014, MMP1195, MMP1356, MMP1425, MMP1048, MMP0137, MMP1361 | nucleic acid phosphodiester bond hydroly..., RNA phosphodiester bond hydrolysis, cellular nitrogen compound metabolic pro..., RNA metabolic process |
mmp-bicluster_0026 | 180 | 4100 | 0.18 | MMP0198, MMP0201, MMP0208, MMP0475, MMP0494, MMP0497, MMP0740, MMP0771, MMP0805, MMP0834, MMP1037, MMP1184, MMP1281, MMP1571 | cofactor biosynthetic process, cofactor metabolic process, N-acetyltransferase activity, N-acyltransferase activity, acetyltransferase activity |
mmp-bicluster_0027 | 0.034 | 2000 | 0.34 | MMP0003, MMP0006, MMP0073, MMP0103, MMP0135, MMP0136, MMP0160, MMP0261, MMP0553, MMP0654, MMP0879, MMP1101, MMP1139, MMP1149, MMP1196, MMP1242, MMP1310, MMP1311, MMP1497, MMP1498, MMP1510, MMP1592, MMP1593, MMP1701, MMP1702, MMP1018, MMP1588 | xenobiotic metabolic process, response to xenobiotic stimulus, phenylacetate catabolic process, xenobiotic catabolic process, benzene-containing compound metabolic pr... |
mmp-bicluster_0028 | 0.00028 | 23 | 0.35 | MMP0072, MMP0165, MMP0256, MMP0257, MMP0265, MMP0313, MMP0342, MMP0684, MMP1066, MMP1171, MMP1265, MMP1303, MMP1573, MMP0166, MMP0167, MMP0168, MMP0511, MMP0536, MMP0608, MMP0812, MMP0843, MMP1051, MMP1657, MMP0630, MMP0631, MMP1467, MMP0499 | Mo-molybdopterin cofactor biosynthetic p..., Mo-molybdopterin cofactor metabolic proc..., molybdopterin cofactor biosynthetic proc..., molybdopterin cofactor metabolic process, prosthetic group metabolic process |
mmp-bicluster_0029 | 1700 | 9300 | 0.34 | MMP0101, MMP0221, MMP0286, MMP0567, MMP0657, MMP0839, MMP0840, MMP1030, MMP1031, MMP1422, MMP1432, MMP1434, MMP1523, MMP1524, MMP1537, MMP1538, MMP0603, MMP1407, MMP1408, MMP1409 | AMP biosynthetic process, AMP metabolic process, nucleobase-containing compound biosynthe..., regulation of transcription, DNA-templat..., regulation of nucleobase-containing comp... |
mmp-bicluster_0030 | 0.0000000012 | 58000 | 0.30 | MMP0209, MMP0303, MMP0332, MMP0416, MMP0445, MMP0532, MMP0601, MMP0724, MMP0726, MMP0734, MMP0754, MMP0755, MMP0764, MMP0765, MMP0770, MMP0798, MMP0827, MMP0846, MMP0915, MMP0916, MMP0944, MMP0972, MMP1225, MMP1632 | transporter activity, iron ion binding |
mmp-bicluster_0031 | 0.0000069 | 510 | 0.33 | MMP0375, MMP0435, MMP0473, MMP0474, MMP0501, MMP0778, MMP0779, MMP0801, MMP0802, MMP0826, MMP0998, MMP1088, MMP1110, MMP1347, MMP1596, MMP0195, MMP0673, MMP0194, MMP0198, MMP0208, MMP0437, MMP0475, MMP0484, MMP0495, MMP0519, MMP0782, MMP1172, MMP0436, MMP0740 | biological regulation |
mmp-bicluster_0032 | 0.00036 | 0.006 | 0.03 | RNA_38, RNA_39, RNA_40, RNA_41, RNA_42, RNA_44 |