Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC2781(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for CAC2781
|Gene||Common Name||Description||Module membership|
|CAC0009||CAC0009||Uncharacterized conserved protein, ortholog of YRXA B.subtilis (NCBI ptt file)||62, 312|
|CAC0134||CAC0134||Hypothetical protein, CF-19 family (NCBI ptt file)||62, 247|
|CAC0146||CAC0146||Related to ABC transporter permease component (NCBI ptt file)||62, 142|
|CAC0147||CAC0147||ABC transporter, ATP-binding protein (NCBI ptt file)||62, 142|
|CAC0148||CAC0148||Predicted enzyme with TIM-barrel fold (NCBI ptt file)||117, 345|
|CAC0160||CAC0160||Predicted acetyltransferase (NCBI ptt file)||185, 345|
|CAC0177||appB||Oligopeptide transport permease protein (NCBI ptt file)||314, 345|
|CAC0205||CAC0205||Predicted phosphohydrolases, Icc family (NCBI ptt file)||62, 279|
|CAC0352||CAC0352||Uncharacterized conserved membrane protein, SANA family (NCBI ptt file)||115, 345|
|CAC0440||CAC0440||Homolog of osmotically induced OSMY protein of E.coli (NCBI ptt file)||62, 207|
|CAC0444||napA||Na/H antiporter (napA) (NCBI ptt file)||62, 174|
|CAC0738||CAC0738||DNA polymerase III epsilon subunit (3'-5' exonuclease) containing BRCT domain (NCBI ptt file)||62, 142|
|CAC0746||CAC0746||Secreted protease metal-dependent protease (NCBI ptt file)||269, 345|
|CAC0750||CAC0750||Hypothetical protein (NCBI ptt file)||62, 342|
|CAC0779||CAC0779||Amidase related to nicotinamidase (NCBI ptt file)||39, 62|
|CAC0934||CAC0934||Hypothetical protein (NCBI ptt file)||62, 177|
|CAC0994||CAC0994||Predicted membrane protein (NCBI ptt file)||100, 345|
|CAC0995||CAC0995||Predicted membrane protein (NCBI ptt file)||80, 345|
|CAC1019||CAC1019||Phospholipase C related protein (NCBI ptt file)||62, 80|
|CAC1160||CAC1160||Hypothetical protein (NCBI ptt file)||25, 345|
|CAC1238||CAC1238||Hypothetical protein (NCBI ptt file)||62, 348|
|CAC1266||CAC1266||Pseudouridylate synthase family protein, yabo B.subtilis ortholog (NCBI ptt file)||67, 345|
|CAC1450||CAC1450||Predicted alpha/beta superfamily hydrolase (NCBI ptt file)||294, 345|
|CAC1592||CAC1592||Predicted permease, YCGR B.subtilis ortholog (NCBI ptt file)||69, 345|
|CAC1791||CAC1791||Undecaprenyl pyrophosphate synthase (NCBI ptt file)||282, 345|
|CAC1860||CAC1860||Predicted flavodoxin oxidoreductase (NCBI ptt file)||62, 312|
|CAC1911||CAC1911||Hypothetical protein (NCBI ptt file)||117, 345|
|CAC1950||CAC1950||Hypothetical protein (NCBI ptt file)||117, 345|
|CAC2055||CAC2055||Predicted transcriptional regulator (NCBI ptt file)||158, 345|
|CAC2168||CAC2168||Uncharacterized conserved protein (NCBI ptt file)||258, 345|
|CAC2287||CAC2287||Acyl-CoA reductase LuxC (NCBI ptt file)||73, 345|
|CAC2298||CAC2298||Predicted nucleotidyltransferase (NCBI ptt file)||91, 345|
|CAC2301||mrcB||Membrane carboxypeptidase mrcB (NCBI ptt file)||239, 345|
|CAC2343||CAC2343||LPS biosynthesis O-acetyl transferase (NCBI ptt file)||100, 345|
|CAC2414||CAC2414||Uncharacterized conserved protein, related to alpha-amylase/alpha-mannosidase (NCBI ptt file)||283, 345|
|CAC2431||CAC2431||Alkaline phosphatase superfamily enzyme (NCBI ptt file)||62, 312|
|CAC2660||pykA||Pyruvate carboxylase, PYKA (NCBI ptt file)||29, 345|
|CAC2682||CAC2682||Hypothetical protein (NCBI ptt file)||62, 300|
|CAC2683||cotF||Related to spore coat protein F (NCBI ptt file)||62, 300|
|CAC2687||recQ||RecQ protein, superfamily II DNA helicase (NCBI ptt file)||113, 345|
|CAC2694||CAC2694||Hypothetical protein (NCBI ptt file)||158, 345|
|CAC2776||CAC2776||Hypothetical protein (NCBI ptt file)||62, 102|
|CAC2781||CAC2781||Hypothetical protein (NCBI ptt file)||62, 345|
|CAC2938||CAC2938||Hypothetical protein (NCBI ptt file)||5, 62|
|CAC2946||CAC2946||Hypothetical protein (NCBI ptt file)||345, 363|
|CAC2961||galT||Galactose-1-phosphate uridyltransferase (NCBI ptt file)||75, 345|
|CAC2988||CAC2988||Uncharacterized conserved protein, YABE B.subtilis ortholog (NCBI ptt file)||267, 345|
|CAC3168||CAC3168||Predicted membrane protein (NCBI ptt file)||62, 344|
|CAC3232||CAC3232||Hypothetical protein (NCBI ptt file)||62, 247|
|CAC3379||CAC3379||Uncharacterized protein, YQFW B.subtilis homolog (NCBI ptt file)||62, 361|
|CAC3392||CAC3392||NADH-dependent butanol dehydrogenase (NCBI ptt file)||62, 91|
|CAC3424||CAC3424||Transcriptional regulator, RpiR family (NCBI ptt file)||158, 345|
|CAC3504||CAC3504||Transcriptional regulator, AcrR family (NCBI ptt file)||62, 235|
|CAC3601||CAC3601||Nudix (MutT) family hydrolase (NCBI ptt file)||62, 259|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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