6835 DUF947Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6835	chr_7	DUF947	606308	607620	-	DUF947

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448997	Thaps6835.2, Thaps6835.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0223

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0284	0.26	0.16 0.049

Most Highly Correlated Transcripts

22099 hypothetical protein 0.9473	41419 (RT4) RpsD 0.9408	29705 18S_RNA_Rcl1p 0.9403	268145 PLN00040 0.9397	268598 COG1094 0.9383	40509 (RL30) Ribosomal_L24e_L24 0.9378
261270 0.937	262775 RBFA 0.937	262018 hypothetical protein 0.9355	10853 hypothetical protein 0.9351

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF947 superfamily		Domain of unknown function (DUF947); Family of eukaryotic proteins with unknown function.	-	80.7867	3.33E-18	203 - 398	superfamily	253564
DUF947 superfamily		Domain of unknown function (DUF947); Family of eukaryotic proteins with unknown function.	-	80.7867	3.33E-18	203 - 398	superfamily	253564

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48376	PHATRDRAFT_48376	252312	311023	Not available	Not available	Not available	485386

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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