Thaps_hclust_0223 Hierarchical Clustering
Thalassiosira pseudonana

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0007049 cell cycle 0.0100926 1 Thaps_hclust_0223
GO:0007186 G-protein coupled receptor protein signaling pathway 0.0300161 1 Thaps_hclust_0223
GO:0006306 DNA methylation 0.0412459 1 Thaps_hclust_0223
GO:0006396 RNA processing 0.081025 1 Thaps_hclust_0223
GO:0005975 carbohydrate metabolism 0.103679 1 Thaps_hclust_0223
GO:0006118 electron transport 0.327122 1 Thaps_hclust_0223
GO:0006355 regulation of transcription, DNA-dependent 0.368277 1 Thaps_hclust_0223

Members

508 : CBF5
20739 : hypothetical protein
24180 : PhyH
262041 : MIF4G
2392 : hypothetical protein
21305 : hypothetical protein
24217 : hypothetical protein
268027 : Met_10
4372 : hypothetical protein
21929 : COG0116
24679 : PCIF1_WW superfamily
268136 : COG1054
5104 : hypothetical protein
21979 : DUF2373 superfamily
24715 : WD40 superfamily
268145 : PLN00040
5484 : DUF914
22036 : ElaC
24878 : COG0412
268417 : hypothetical protein
6380 : hypothetical protein
22045 : (Tp_CCHH10) regulator [Rayko]
25139 : RRN3 superfamily
268486 : Glyco_transf_22 superfamily
6835 : DUF947
22296 : hypothetical protein
25359 : hypothetical protein
268596 : CBF
8270 : ANK
22628 : hypothetical protein
25800 : hypothetical protein
268744 : SUA5
11606 : hypothetical protein
22635 : SIK1
29705 : 18S_RNA_Rcl1p
269049 : hypothetical protein
11824 : hypothetical protein
23209 : hypothetical protein
30862 : PTZ00368
269449 : hypothetical protein
13378 : PRK13762
23242 : PRK00142
31215 : LbH_gamma_CA_like
269559 : hypothetical protein
13982 : SrmB
23277 : EEP superfamily
40265 : PTZ00448
269975 : (Tp_TAZ2) regulator [Rayko]
17654 : REX4_like
23300 : hypothetical protein
42152 : WD40
bd74 : (bd74) T6A_YgjD
20682 : hypothetical protein

Conditions

Condition Condition Difference FDR
diel_light_vs_dark diel_light_vs_dark -0.387 0.000485
lowFe_KTKB_Day3 lowFe_KTKB_Day3 0.007 0.974
lowFe_KTKB_Day5 lowFe_KTKB_Day5 -0.054 0.699
BaP BaP 1.360 0.00037
exponential_vs_stationary_24highlight exponential_vs_stationary_24highlight -0.220 0.000526
co2_elevated_stat_arrays co2_elevated_stat_arrays 0.847 0.000658
lowtemp_TMEVA lowtemp_TMEVA 0.902 0.000735
highpH_TMEVA highpH_TMEVA -0.091 0.45
co2_elevated_expo_arrays co2_elevated_expo_arrays -0.007 0.991
lowFe_TMEVA lowFe_TMEVA -0.067 0.857
exponential_vs_stationary_24light exponential_vs_stationary_24light -0.920 0.000581
lowN_TMEVA lowN_TMEVA 0.611 0.00119
diel_exponential_vs_stationary diel_exponential_vs_stationary -0.401 0.000602
lowSi_TMEVA lowSi_TMEVA 0.078 1
highlight_arrays highlight_arrays 0.205 0.0384

Motifs

MEME Output