ThpsCt027 (trnN(guu)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt027	chloroplast	(trnN(guu))	109973	110044	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524861	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0061

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd1545 (bd1545) psbC 0.8804	bd1287 (bd1287) PRK09281 0.8274	bd790 (bd790) ABCC_MRP_domain2 0.8028	bd1313 (bd1313) psbH 0.7962	bd951 (bd951) NA 0.7653	ThpsCt010 (trnD(guc)) 0.7334
bd1013 (bd1013) PRX_Typ2cys 0.7289	ThpsCt023 (trnQ(uug)) 0.7272	bd1154 (bd1154) tpt 0.7255	bd1736 (bd1736) Photo_RC superfamily 0.7205

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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