Organism : Geobacter sulfurreducens | Module List :
chemotaxis protein methyltransferase CheR,putative (VIMSS)
Functional Annotations (4)
|Methylase of chemotaxis methyl-accepting proteins||cog/ cog|
|protein-glutamate O-methyltransferase activity||go/ molecular_function|
|Two-component system||kegg/ kegg pathway|
|Bacterial chemotaxis||kegg/ kegg pathway|
Regulation information for GSU3195(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for GSU3195
Module neighborhood information for GSU3195
|Gene||Common Name||Description||Module membership|
|GSU0082||RluD||ribosomal large subunit pseudouridine synthase D (NCBI)||261, 326|
|GSU0277||GSU0277||ABC transporter, ATP-binding/permease protein (VIMSS)||104, 304|
|GSU0459||GSU0459||Beta-ketoacyl synthase domain protein (VIMSS)||104, 218|
|GSU0523||pabB||para-aminobenzoate synthase, component I (NCBI)||71, 104|
|GSU0747||GSU0747||conserved hypothetical protein (VIMSS)||104, 232|
|GSU0770||GSU0770||transcriptional regulator, TetR family (VIMSS)||104, 118|
|GSU0913||GSU0913||ABC transporter, ATP-binding protein (VIMSS)||104, 232|
|GSU0931||GSU0931||Rhodanese-like domain protein (VIMSS)||104, 226|
|GSU1059||sucD||succinyl-CoA synthase, alpha subunit (NCBI)||100, 326|
|GSU1156||asnS||asparaginyl-tRNA synthetase (NCBI)||104, 278|
|GSU1161||GSU1161||efflux transporter, RND family, MFP subunit (NCBI)||310, 326|
|GSU1251||GSU1251||BNR repeat domain protein (VIMSS)||66, 104|
|GSU1252||GSU1252||conserved domain protein (NCBI)||66, 104|
|GSU1253||GSU1253||hypothetical protein (VIMSS)||66, 104|
|GSU1254||GSU1254||hypothetical protein (VIMSS)||6, 104|
|GSU1255||GSU1255||conserved hypothetical protein (NCBI)||95, 104|
|GSU1257||GSU1257||ABC transporter, periplasmic-substrate binding protein, putative (VIMSS)||104, 232|
|GSU1435||GSU1435||peptide ABC transporter, permease protein (VIMSS)||104, 338|
|GSU1551||GSU1551||bacterial signal domain protein (VIMSS)||104, 244|
|GSU1614||GSU1614||CoA-binding protein (VIMSS)||20, 326|
|GSU1711||GSU1711||integrative genetic element Gsu5, resolvase (VIMSS)||45, 104|
|GSU1723||GSU1723||mechanosensitive ion channel family protein (NCBI)||104, 294|
|GSU2041||GSU2041||sigma-54 dependent DNA-binding response regulator (VIMSS)||71, 104|
|GSU2123||GSU2123||HD domain protein (NCBI)||104, 278|
|GSU2400||GSU2400||conserved hypothetical protein (VIMSS)||104, 226|
|GSU2573||GSU2573||hypothetical protein (VIMSS)||104, 296|
|GSU2788||GSU2788||conserved hypothetical protein (NCBI)||128, 326|
|GSU3130||GSU3130||lipoprotein, putative (VIMSS)||100, 326|
|GSU3138||GSU3138||sensor histidine kinase/response regulator (VIMSS)||100, 326|
|GSU3192||GSU3192||heat shock protein, Hsp20 family (NCBI)||104, 326|
|GSU3193||loN-3||ATP-dependent protease La (NCBI)||104, 246|
|GSU3194||thiL||thiamine monophosphate kinase (NCBI)||128, 326|
|GSU3195||GSU3195||chemotaxis protein methyltransferase CheR,putative (VIMSS)||104, 326|
|GSU3196||GSU3196||methyl-accepting chemotaxis protein (VIMSS)||246, 326|
|GSU3197||GSU3197||purine-binding chemotaxis protein CheW, putative (VIMSS)||246, 326|
|GSU3198||cheY-7||chemotaxis protein CheY (NCBI)||189, 326|
|GSU3199||cheA-3||chemotaxis protein CheA (NCBI)||246, 326|
|GSU3200||GSU3200||chemotaxis protein, CheC family (NCBI)||100, 326|
|GSU3201||GSU3201||chemotaxis protein CheD, putative (VIMSS)||104, 326|
|GSU3202||GSU3202||hypothetical protein (VIMSS)||189, 326|
|GSU3203||GSU3203||outer membrane lipoprotein carrier protein LolA, putative (NCBI)||104, 183|
|GSU3390||GSU3390||membrane protein, putative (VIMSS)||104, 226|
|GSU3442||GSU3442||conserved hypothetical protein (VIMSS)||167, 326|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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