Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP1710(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 6 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP1710
|Gene||Common Name||Description||Module membership|
|MMP0026||DP2||DNA polymerase II large subunit||25, 41, 92|
|MMP0033||LysR family protein||87, 109|
|MMP0036||tfe||transcription initiation factor E subunit alpha||49, 87, 92, 129|
|MMP0043||isopentenyl pyrophosphate isomerase||61, 92|
|MMP0044||beta-lactamase domain-containing protein||11, 20|
|MMP0045||idsA||bifunctional short chain isoprenyl diphosphate synthase||20, 61|
|MMP0046||hypothetical protein MMP0046||20, 51, 140|
|MMP0092||rpoF||DNA-directed RNA polymerase subunit F||87, 109|
|MMP0093||50S ribosomal protein L21e||8, 11, 20|
|MMP0099||major facilitator transporter||14, 92|
|MMP0134||hypothetical protein MMP0134||24, 92|
|MMP0155||hypothetical protein MMP0155||61, 87|
|MMP0246||hypothetical protein MMP0246||87, 109|
|MMP0247||ribosomal biogenesis protein||87, 109|
|MMP0248||DNA-directed RNA polymerase-like protein||87, 109|
|MMP0316||iorA1||indolepyruvate oxidoreductase subunit alpha 1||25, 64, 87|
|MMP0384||hypothetical protein MMP0384||61, 87|
|MMP0398||hypothetical protein MMP0398||70, 80, 87|
|MMP0403||hypothetical protein MMP0403||87, 115|
|MMP0404||cofD||2-phospho-L-lactate transferase||87, 137|
|MMP0405||gch3||GTP cyclohydrolase III||19, 92|
|MMP0412||MiaB-like tRNA modifying protein||4, 25, 87|
|MMP0457||DEAD/DEAH box helicase domain-containing protein||61, 92|
|MMP0530||hypothetical protein MMP0530||92, 140|
|MMP0566||AMP-binding domain-containing protein||92, 109|
|MMP0596||C/D box methylation guide ribonucleoprotein complex aNOP56 subunit||20, 81|
|MMP0603||aIF-1A||translation initiation factor IF-1A||29, 87, 109, 162|
|MMP0604||hypothetical protein MMP0604||87, 109|
|MMP0639||50S ribosomal protein L24e||16, 92, 130|
|MMP0640||rps28e||30S ribosomal protein S28e||16, 92, 130|
|MMP0641||rpl7ae||50S ribosomal protein L7Ae||16, 92, 130|
|MMP0671||ywbE||hypothetical protein MMP0671||51, 87|
|MMP0682||hypothetical protein MMP0682||67, 92|
|MMP0695||psmB||proteasome subunit beta||51, 92|
|MMP0707||sodium/hydrogen exchanger||87, 109, 140|
|MMP0760||hypothetical protein MMP0760||22, 67, 92|
|MMP0878||ribonuclease P-like protein||25, 87, 140|
|MMP0901||ATP/GTP-binding motif-containing protein||20, 51|
|MMP0943||taqD||glycerol-3-phosphate cytidyltransferase||92, 111|
|MMP0975||modA||molybdenum ABC transporter solute-binding protein||64, 92|
|MMP1131||peptide chain release factor 1||20, 81|
|MMP1208||aIF2_gamma||translation initiation factor IF-2 subunit gamma||20, 61, 96|
|MMP1211||hypothetical protein MMP1211||89, 92|
|MMP1289||rpl10e||50S ribosomal protein L10e||3, 92, 105|
|MMP1318||lysS||lysyl-tRNA synthetase||20, 21|
|MMP1319||rps13p||30S ribosomal protein S13P||92, 103, 118|
|MMP1361||rpoB2||DNA-directed RNA polymerase subunit beta''||25, 92, 109, 149|
|MMP1379||thyA||thymidylate synthase||64, 92|
|MMP1381||beta-lactamase-like protein||51, 92|
|MMP1400||hypothetical protein MMP1400||61, 92, 97, 105|
|MMP1403||rpl22p||50S ribosomal protein L22P||3, 61, 92, 96, 97, 105|
|MMP1425||tRNA 2'-O-methylase||25, 87, 140|
|MMP1443||ATP/GTP-binding motif-containing protein||20, 61, 92|
|MMP1444||methionine aminopeptidase||20, 51, 61, 92|
|MMP1445||guaA||GMP synthase subunit A||20, 61|
|MMP1473||hypothetical protein MMP1473||11, 20|
|MMP1474||ileS||isoleucyl-tRNA synthetase||16, 20|
|MMP1480||aconitase family||60, 87, 92|
|MMP1509||hypothetical protein MMP1509||11, 20|
|MMP1511||amino acid carrier protein||19, 92|
|MMP1543||rpl3p||50S ribosomal protein L3P||63, 92, 128|
|MMP1582||pdaD||pyruvoyl-dependent arginine decarboxylase||87, 149|
|MMP1705||creatininase||8, 11, 20|
|MMP1706||H/ACA RNA-protein complex component Nop10p||20, 21|
|MMP1707||aIF2_alpha||translation initiation factor IF-2 subunit alpha||20, 21|
|MMP1708||rps27e||30S ribosomal protein S27e||11, 20|
|MMP1709||rpl44e||50S ribosomal protein L44e||11, 20|
|MMP1710||hypothetical protein MMP1710||20, 87, 92|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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