Rv0081 transcriptional regulator, ArsR family

Rv0081 (transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0143 with residual 0.53 and bicluster_0391 with residual 0.53.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 130.00 for bicluster_0143 and 0.00 and 0.00 for bicluster_0391 respectively.

These modules are enriched for following go terms: cellular respiration, energy derivation by oxidation of organi..., generation of precursor metabolites and ..., oxidation-reduction process, NADH dehydrogenase activity, oxidoreductase activity, acting on NAD(P..., oxidoreductase activity, acting on NAD(P... .

This gene is found to be for growth on cholesterol.

Mutant available?: Yes

Displaying 61 - 70 of 352
Gene Target Differential Expression Distance Expression pvalue Type
Acyl-CoA dehydrogenase (EC 1.3.99.3)
No -28 0.5 0.00174075 Primary.TSS
Transmembrane transport protein MmpL5
No -88 0.25 0.18488 Primary.TSS
Ferredoxin reductase
No 14 0.44 0.0000485 CDS
Ferredoxin reductase
No -26 0.44 0.0000485 Internal.TSS
Creatinine amidohydrolase (EC 3.5.2.10)
Induced -84 0.84 0.00000625 Internal.TSS
Creatinine amidohydrolase (EC 3.5.2.10)
Induced -60 0.84 0.00000625 CDS
SSU ribosomal protein S17p (S11e)
No -143 0.14 0.520706 CDS
LSU ribosomal protein L15p (L27Ae)
No -113 -0.14 0.424542 CDS
Induced 26 0.83 0.000000000163 CDS
Induced -16 0.83 0.000000000163 Internal.TSS
not assigned to any KEGG Pathway.
GO:0005886

plasma membrane

plasma membrane

Details: 
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO Category: 
cellular_component
1284
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 10.64 U
D3I 3 3 3.83 9.89 I
D3U 3 3 3.83 9.37 U
D5I 9 5 6.00 8.58 I
D5U 17 5 6.00 10.80 U
D7I 18 7 8.14 6.92 I
D7U 19 7 8.14 10.06 U
D14I 4 14 15.63 3.26 I
D14U 4 14 15.63 8.26 U
D17I 3 17 19.15 3.92 I
D17U 3 17 19.15 8.44 U
D21I 4 21 23.23 3.88 I
D21U 4 21 23.23 7.77 U
D24I 3 24 26.60 3.58 I
D24U 3 24 26.60 8.02 U
D28I 4 28 30.61 3.78 I
D28U 4 28 30.61 7.39 U