Rv1423

Rv1423 () is predicted to be co-regulated in modules bicluster_0266 with residual 0.50 and bicluster_0329 with residual 0.54.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 41.00 and 620.00 for bicluster_0266 and 0.00 and 1.10 for bicluster_0329 respectively.

These modules are enriched for following go terms: inositol metabolic process, inositol biosynthetic process, polyol biosynthetic process, acyl-CoA dehydrogenase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 21 - 30 of 119
Gene Target Differential Expression Distance Expression pvalue Type
\3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)\\\""
No -29 -0.23 0.454227 Primary.TSS
No -19 0.08 0.918664 CDS
LSU ribosomal protein L10p (P0)
No -69 -0.05 0.923677 Primary.TSS
SSU ribosomal protein S12p (S23e)
No 63 0.05 0.923246 Primary.TSS
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
No -99 0 0.993774 CDS
LSU ribosomal protein L3p (L3e)
No -11 -0.12 0.807978 Primary.TSS
Possible membrane protein
No -106 0.25 0.510484 Primary.TSS
HIT family protein
No -124 -0.07 0.904896 CDS
No 9 0.08 0.893923 CDS
No 36 0.11 0.789277 Primary.TSS
not assigned to any KEGG Pathway.
GO:0005618

cell wall

cell wall

Details: 
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan.
GO Category: 
cellular_component
320
Total items in this category:  
GO:0005886

plasma membrane

plasma membrane

Details: 
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO Category: 
cellular_component
1284
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 13.09 U
D3I 3 3 3.83 13.09 I
D3U 3 3 3.83 12.72 U
D5I 9 5 6.00 10.77 I
D5U 17 5 6.00 10.75 U
D7I 18 7 8.14 12.07 I
D7U 19 7 8.14 12.16 U
D14I 4 14 15.63 4.41 I
D14U 4 14 15.63 8.82 U
D17I 3 17 19.15 2.26 I
D17U 3 17 19.15 8.56 U
D21I 4 21 23.23 1.73 I
D21U 4 21 23.23 7.24 U
D24I 3 24 26.60 1.96 I
D24U 3 24 26.60 7.47 U
D28I 4 28 30.61 I
D28U 4 28 30.61 6.14 U