Rv2324 Transcriptional regulator, AsnC family

Rv2324 (Transcriptional regulator, AsnC family) is predicted to be co-regulated in modules bicluster_0346 with residual 0.51 and bicluster_0420 with residual 0.47.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.14 for bicluster_0346 and 0.00 and 0.00 for bicluster_0420 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 128
Gene Target Differential Expression Distance Expression pvalue Type
Programmed cell death toxin YdcE
No -117 0.01 0.993351 CDS
Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30)
No -38 0.1 0.961751 Primary.TSS
Mycolic acid synthase (PcaA/UmaA2) (Cyclopropane Synthase)
No -84 -0.07 0.929337 Primary.TSS
Iron-regulated heparin binding hemagglutinin HbhA (Adhesin)
No -7 0.17 0.860369 CDS
Possible lipoprotein LprQ
No -73 -0.08 0.934583 Internal.TSS
Possible lipoprotein LprQ
No -33 -0.08 0.934583 CDS
Possible membrane protein
No -141 0.21 0.7394 CDS
Cytochrome P450 135B1
Repressed 39 -0.93 0.00000000000000139 Primary.TSS
No -140 -0.29 0.816822 CDS
LSU ribosomal protein L10p (P0)
No -60 0.22 0.889255 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 12.79 U
D3I 3 3 3.83 12.85 I
D3U 3 3 3.83 13.00 U
D5I 9 5 6.00 13.44 I
D5U 17 5 6.00 14.02 U
D7I 18 7 8.14 11.63 I
D7U 19 7 8.14 12.96 U
D14I 4 14 15.63 5.04 I
D14U 4 14 15.63 12.17 U
D17I 3 17 19.15 3.15 I
D17U 3 17 19.15 11.85 U
D21U 4 21 23.23 12.32 U
D21I 4 21 23.23 7.99 I
D24I 3 24 26.60 I
D24U 3 24 26.60 12.06 U
D28I 4 28 30.61 4.59 I
D28U 4 28 30.61 12.59 U