Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
putative Aldehyde dehydrogenase (NCBI)
Functional Annotations (21)
Regulation information for RSP_1292(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for RSP_1292
Module neighborhood information for RSP_1292
|Gene||Common Name||Description||Module membership|
|RSP_0010||RSP_0010||homoserine O-succinyltransferase (NCBI)||91, 133|
|RSP_0011||RSP_0011||Predicted hydrolases or acyltransferases (alpha/beta hydrolase) (NCBI)||91, 366|
|RSP_0013||RSP_0013||hypothetical protein (NCBI)||68, 91|
|RSP_0014||RSP_0014||transcriptional regulator, TetR family (NCBI)||91, 215|
|RSP_0148||RSP_0148||Signal transduction histidine kinase (NCBI)||107, 335|
|RSP_0149||RSP_0149||CheY-like receiver protein (NCBI)||107, 112|
|RSP_0153||RSP_0153||hypothetical protein (NCBI)||107, 278|
|RSP_0198||RSP_0198||Phosphatidylglycerophosphate synthase (NCBI)||107, 121|
|RSP_0365||RSP_0365||hypothetical protein (NCBI)||107, 185|
|RSP_0388||RSP_0388||hypothetical protein (NCBI)||107, 377|
|RSP_0392||RSP_0392||probable lactoylglutathione lyase (NCBI)||107, 239|
|RSP_0393||RSP_0393||probable riboflavin biosynthesis protein (NCBI)||107, 323|
|RSP_0552||RSP_0552||putative multidrug transporter, SMR family, DMT Superfamily (NCBI)||107, 302|
|RSP_0774||RSP_0774||RNA binding protein (NCBI)||91, 184|
|RSP_0795||RSP_0795||hypothetical protein (NCBI)||107, 185|
|RSP_0865||RSP_0865||hypothetical protein (NCBI)||107, 345|
|RSP_0935||RSP_0935||MiaB-like Radical SAM protein (NCBI)||63, 107|
|RSP_1018||RSP_1018||Glycolate oxidase iron-sulfur subunit (NCBI)||91, 148|
|RSP_1019||RSP_1019||putative glycolate oxidase subunit protein (NCBI)||91, 148|
|RSP_1032||RSP_1032||possible O6-methylguanine-DNA methyltransferase (NCBI)||76, 107|
|RSP_1034||pdhR||Pyruvate dehydrogenase complex repressor (NCBI)||91, 148|
|RSP_1130||RSP_1130||hypothetical membrane protein (NCBI)||54, 91|
|RSP_1172||dnaJ||Chaperone, DnaJ (NCBI)||91, 297|
|RSP_1234||aroE||putative shikimate 5-dehydrogenase (NCBI)||107, 308|
|RSP_1292||RSP_1292||putative Aldehyde dehydrogenase (NCBI)||91, 107|
|RSP_1487||RSP_1487||hypothetical protein (NCBI)||91, 289|
|RSP_1488||RSP_1488||Possible glyoxalase (NCBI)||91, 289|
|RSP_1516||RSP_1516||putative S-adenosyl L-homocystein hydrolase (NCBI)||91, 197|
|RSP_1558||RSP_1558||putative 2-dehydropantoate 2-reductase (NCBI)||107, 136|
|RSP_1895||RSP_1895||Small-conductance mechanosensitive ion channel (NCBI)||91, 231|
|RSP_1899||RSP_1899||Predicted ATPase (NCBI)||91, 220|
|RSP_1900||RSP_1900||hypothetical protein (NCBI)||91, 233|
|RSP_1901||RSP_1901||Hypothetical protein with TPR repeat (NCBI)||91, 245|
|RSP_1965||RSP_1965||Putative Membrane Fusion Protein Family member (NCBI)||107, 247|
|RSP_1971||rnd||Ribonuclease D (NCBI)||51, 107|
|RSP_1984||RSP_1984||histidinol-phosphate-aminotransferase (NCBI)||107, 171|
|RSP_2127||purS||Component of phosphoribosylformylglycinamidine (FGAM) synthetase (NCBI)||107, 261|
|RSP_2165||putR||transcriptional regulator, AsnC family (NCBI)||107, 126|
|RSP_2241||hisI||Phosphoribosyl-ATP pyrophosphohydrolase (NCBI)||107, 294|
|RSP_2263||RSP_2263||hypothetical protein (NCBI)||91, 125|
|RSP_2282||chrA||Chromate efflux pump, ChrA (NCBI)||10, 107|
|RSP_2287||RSP_2287||ChaC-like protein (NCBI)||107, 317|
|RSP_2411||RSP_2411||hypothetical protein (NCBI)||20, 107|
|RSP_2456||radA||DNA Repair Protein (NCBI)||39, 91|
|RSP_2605||RSP_2605||hypothetical protein (NCBI)||91, 197|
|RSP_2606||RSP_2606||ArsR family Arsenical Resistance Operon Repressor (NCBI)||91, 197|
|RSP_2607||RSP_2607||nitrilotriacetate monooxygenase component B (NCBI)||91, 197|
|RSP_2608||corA||magnesium/cobalt transport protein, MIT family (NCBI)||91, 197|
|RSP_2642||RSP_2642||hypothetical protein (NCBI)||107, 121|
|RSP_2810||RSP_2810||ABC transporter, ATPase subunit (NCBI)||91, 294|
|RSP_2903||RSP_2903||Probable PpiC-type peptidyl-prolyl cis-trans isomerase (NCBI)||107, 223|
|RSP_3071||RSP_3071||putative hydroxypyruvate reductase/glycerate kinase (NCBI)||107, 329|
|RSP_3107||RSP_3107||hypothetical protein (NCBI)||91, 350|
|RSP_3309||RSP_3309||transcriptional regulator, AraC family (NCBI)||63, 107|
|RSP_3350||RSP_3350||Lipocalin-related protein (NCBI)||107, 293|
|RSP_3384||RSP_3384||mandelate racemase/muconate lactonizing enzyme family protein (NCBI)||91, 346|
|RSP_3435||RSP_3435||possible DNA-binding protein (NCBI)||91, 316|
|RSP_3456||RSP_3456||Putative dihydrodipicolinate synthase (NCBI)||61, 91|
|RSP_3695||argE||putative acetylornithine deacetylase (acetylornithinase) (NCBI)||1, 107|
|RSP_3785||RSP_3785||putative bacteriophage-related protein (NCBI)||91, 105|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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