Organism : Bacillus cereus ATCC14579 | Module List :
Regulation information for BC1934(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BC1934
|Gene||Common Name||Description||Module membership|
|BC0065||BC0065||Cell division protein DIVIC (NCBI ptt file)||41, 275|
|BC0539||BC0539||hypothetical protein (RefSeq)||41, 169|
|BC0840||BC0840||Transcriptional regulator, RpiR family (NCBI ptt file)||41, 261|
|BC1023||BC1023||Transporter, LysE family (NCBI ptt file)||41, 480|
|BC1086||BC1086||Lipoate-protein ligase A (NCBI ptt file)||180, 227|
|BC1298||BC1298||Carbohydrate diacid regulator (NCBI ptt file)||41, 261|
|BC1381||BC1381||hypothetical protein (NCBI ptt file)||180, 224|
|BC1382||BC1382||hypothetical protein (NCBI ptt file)||126, 180|
|BC1744||BC1744||SWF/SNF family helicase (NCBI ptt file)||41, 406|
|BC1934||BC1934||hypothetical protein (NCBI ptt file)||41, 180|
|BC2018||BC2018||IolS protein (NCBI ptt file)||180, 491|
|BC2019||BC2019||Low-affinity zinc transport protein (NCBI ptt file)||74, 180|
|BC2022||BC2022||Oxidoreductase (NCBI ptt file)||118, 180|
|BC2295||BC2295||Exonuclease SbcD (NCBI ptt file)||41, 193|
|BC2340||BC2340||Transcriptional regulator, TetR family (NCBI ptt file)||180, 480|
|BC2439||BC2439||Aminoacyl-histidine dipeptidase (NCBI ptt file)||180, 227|
|BC2447||BC2447||Chloramphenicol acetyltransferase (NCBI ptt file)||41, 98|
|BC2748||BC2748||Integral membrane protein (NCBI ptt file)||41, 228|
|BC2886||BC2886||hypothetical protein (NCBI ptt file)||41, 354|
|BC3368||BC3368||6-phosphogluconolactonase (NCBI ptt file)||110, 180|
|BC3453||BC3453||N-acyl homoserine lactone hydrolase (NCBI ptt file)||173, 180|
|BC3463||BC3463||Arsenical pump membrane protein (NCBI ptt file)||110, 180|
|BC3611||BC3611||DNA polymerase III alpha subunit (NCBI ptt file)||41, 261|
|BC3950||BC3950||hypothetical protein (NCBI ptt file)||152, 180|
|BC4009||BC4009||Aromatic amino acid aminotransferase (NCBI ptt file)||180, 480|
|BC4096||BC4096||D-threo-aldose 1-dehydrogenase (NCBI ptt file)||110, 180|
|BC4262||BC4262||5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file)||41, 394|
|BC4321||BC4321||DNA polymerase III, delta subunit (NCBI ptt file)||41, 273|
|BC4405||BC4405||Protein translocase subunit SecD / Protein translocase subunit SecF (NCBI ptt file)||180, 201|
|BC4505||BC4505||Transcriptional regulator (NCBI ptt file)||41, 261|
|BC4562||BC4562||23S rRNA methyltransferase (NCBI ptt file)||41, 261|
|BC4589||BC4589||Alkaline phosphatase synthesis two-component response regulator phoP (NCBI ptt file)||41, 527|
|BC4727||BC4727||hypothetical protein (NCBI ptt file)||41, 385|
|BC4728||BC4728||Molybdopterin biosynthesis MoeB protein (NCBI ptt file)||41, 90|
|BC4907||BC4907||Superoxide dismutase [Cu-Zn] (NCBI ptt file)||155, 180|
|BC5028||BC5028||Two-component response regulator vanRB (NCBI ptt file)||6, 41|
|BC5352||BC5352||two-component response regulator YocG (NCBI)||41, 440|
|BC5353||BC5353||Two-component sensor kinase yocF (NCBI ptt file)||41, 440|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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