Organism : Bacillus subtilis | Module List :
Regulation information for BSU23090(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU23090
|Gene||Common Name||Description||Module membership|
|BSU00980||sigH||RNA polymerase factor sigma-70 (RefSeq)||36, 145|
|BSU01730||sigW||RNA polymerase sigma factor SigW (RefSeq)||159, 166|
|BSU01740||rsiW||anti-sigma(W) factor (RefSeq)||159, 166|
|BSU04020||yczH||putative hydrolase (RefSeq)||64, 145|
|BSU04030||ycsD||putative hydroxymyristoyl-(acyl carrier protein) dehydratase (RefSeq)||145, 177|
|BSU04120||yczI||hypothetical protein (RefSeq)||145, 263|
|BSU05120||cspC||cold-shock protein (RefSeq)||151, 159|
|BSU05200||ydeH||putative integral inner membrane protein (RefSeq)||115, 159|
|BSU06270||ydjO||hypothetical protein (RefSeq)||159, 266|
|BSU08390||yfiT||metal-dependent hydrolase (RefSeq)||145, 152|
|BSU09490||yhdJ||putative acetyltransferase (RefSeq)||145, 318|
|BSU11300||med||positive regulator of comK (RefSeq)||14, 159|
|BSU11910||yjcM||hypothetical protein (RefSeq)||7, 145|
|BSU11920||yjcN||hypothetical protein (RefSeq)||36, 159|
|BSU11930||yjcO||putative DNA binding protein (RefSeq)||36, 159|
|BSU12040||yjdG||putative acetyltransferase (RefSeq)||49, 159|
|BSU13200||rsbRB||component of the piezosome (stressosome) (RefSeq)||78, 145|
|BSU13320||ykzB||hypothetical protein (RefSeq)||159, 216|
|BSU14540||ykzG||hypothetical protein (RefSeq)||36, 145|
|BSU14570||ykyA||putative chromosome partitioning protein (RefSeq)||36, 145|
|BSU14760||ylaF||hypothetical protein (RefSeq)||36, 145|
|BSU14990||ylbF||putative regulatory protein (RefSeq)||159, 170|
|BSU15280||ftsA||cell-division protein essential fo Z-ring assembly (RefSeq)||63, 145|
|BSU15290||ftsZ||cell division protein FtsZ (RefSeq)||63, 145|
|BSU17060||ymzD||putative integral inner membrane protein (RefSeq)||115, 159|
|BSU17230||pksS||cytochrome P450 of bacillaene metabolism (RefSeq)||36, 159|
|BSU18650||pelB||pectin lyase (RefSeq)||159, 179|
|BSU18980||yobJ||hypothetical protein (RefSeq)||159, 166|
|BSU21780||yplP||transcriptional enhancer (RefSeq)||159, 226|
|BSU23090||rsiX||negative regulator of sigma(X) activity (RefSeq)||145, 159|
|BSU23100||sigX||RNA polymerase sigma factor SigX (RefSeq)||145, 159|
|BSU23220||scpA||segregation and condensation protein A (RefSeq)||145, 166|
|BSU23310||sipS||type I signal peptidase (RefSeq)||94, 159|
|BSU23720||yqzH||hypothetical protein (RefSeq)||159, 270|
|BSU23730||yqjV||putative efflux transporter (RefSeq)||36, 159|
|BSU25050||yqgA||hypothetical protein (RefSeq)||7, 145|
|BSU25090||yqfW||putative nucleotidase (RefSeq)||151, 159|
|BSU25560||holA||DNA polymerase III subunit delta (RefSeq)||151, 159|
|BSU25690||sda||check point factor coupling initiation of sporulation and replication initiation (RefSeq)||36, 159|
|BSU25700||yqeF||putative lipoprotein; putative esterase (RefSeq)||121, 159|
|BSU26160||yqbC||conserved hypothetical protein; skin element (RefSeq)||145, 291|
|BSU26610||yrkA||putative membrane associated protein (RefSeq)||159, 170|
|BSU31460||kapB||factor required for KinB signal transduction and activation of the phosphorelay to sporulation (RefSeq)||145, 150|
|BSU31710||comQ||isoprenyl transferase (pre-ComX modification) (RefSeq)||145, 317|
|BSU33040||fumC||fumarate hydratase (RefSeq)||70, 145|
|BSU33890||yvbK||putative acyltransferase (RefSeq)||36, 145|
|BSU35440||yvyF||putative regulator of flagella formation (RefSeq)||7, 145|
|BSU35480||yviA||hypothetical protein (RefSeq)||145, 155|
|BSU35650||lytR||membrane-bound transcriptional regulator LytR (RefSeq)||145, 166|
|BSU35840||ywtF||putative transcriptional regulator (RefSeq)||159, 170|
|BSU38550||ywaA||branched-chain amino acid aminotransferase (RefSeq)||123, 145|
|BSU38860||galE||UDP-glucose 4-epimerase (RefSeq)||36, 145|
|BSU39010||yxjB||putative ribosomal RNA methyltransferase (RefSeq)||51, 159|
|BSU39240||yxxF||putative transporter (RefSeq)||159, 350|
|BSU40200||yydD||hypothetical protein (RefSeq)||36, 145|
|BSU40210||yydC||hypothetical protein (RefSeq)||36, 145|
|BSU40220||yydB||putative phosphohydrolase (RefSeq)||36, 145|
|BSU40470||yycC||hypothetical protein (RefSeq)||159, 191|
|BSU40480||yycB||putative anion ABC transporter (permease) (RefSeq)||159, 191|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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