In vitro growth

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 113 items in this group

Module_404 - Residual: 0.43 Type: Module
Motif 1: e-value: 0.12
Motif 2: e-value: 0.51
1st Quintile:
5th Quintile: In vitro growth
Module_403 - Residual: 0.51 Type: Module
Motif 1: e-value: 0.000013
Motif 2: e-value:
1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth
Module_401 - Residual: 0.55 Type: Module
Motif 1: e-value: 0.00000000016
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_399 - Residual: 0.26 Type: Module
Motif 1: e-value:
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_385 - Residual: 0.45 Type: Module
Motif 1: e-value: 0.49
Motif 2: e-value:
1st Quintile: Sporulation
5th Quintile: In vitro growth
Module_384 - Residual: 0.58 Type: Module
Motif 1: e-value: 0.000000047
Motif 2: e-value: 0.09
1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth
Module_382 - Residual: 0.41 Type: Module
Motif 1: e-value:
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_377 - Residual: 0.51 Type: Module
Motif 1: e-value: 0.00042
Motif 2: e-value: 0.04
1st Quintile: In vivo vs. In vitro, In vitro growth
5th Quintile:
Module_373 - Residual: 0.52 Type: Module
Motif 1: e-value: 0.000000015
Motif 2: e-value: 0.00000086
1st Quintile:
5th Quintile: In vitro growth
Module_371 - Residual: 0.62 Type: Module
Motif 1: e-value: 0.00000000000058
Motif 2: e-value: 0.000000016
1st Quintile:
5th Quintile: In vitro growth