10603 DUF563Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10603	chr_17	DUF563	201381	202754	+	DUF563

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453134	Thaps10603.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0438

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0046	0.42	0.56 320

Most Highly Correlated Transcripts

8489 GlcNAc superfamily 0.9203	4322 PLN00113 0.894	25576 Galactosyl_T superfamily 0.886	27813 Hid1 superfamily 0.8821	262863 BAR_SNX 0.882	268619 Ras_like_GTPase superfamily 0.8808
22468 hypothetical protein 0.8799	38652 PI-PLCc_eukaryota 0.8779	268467 PP2Cc 0.8762	10940 RRM_UHM_SPF45_PUF60 0.8757

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF563		Protein of unknown function (DUF563); Family of uncharacterized proteins.	cl15705	66.2842	7.63E-13	211 - 435	specific	252682
DUF563 superfamily		Protein of unknown function (DUF563); Family of uncharacterized proteins.	-	66.2842	7.63E-13	211 - 435	superfamily	265766

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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