10946 CwfJ_C_1 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10946	chr_18	CwfJ_C_1 superfamily	509160	510732	-	CwfJ_C_1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444787	Thaps10946.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0427

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0061	0.42	65 13

Most Highly Correlated Transcripts

29013 PAP1 0.8809	13308 PLN02948 0.8767	bd737 (bd737) NA 0.8744	268443 SAICAR_synt_Sc 0.8722	9108 PRP3 superfamily 0.865	4599 hypothetical protein 0.8616
267979 HCO3_cotransp superfamily 0.8609	269391 MATE_like superfamily 0.8595	19158 GRX_PICOT_like 0.8593	12899 AAA 0.8577

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CwfJ_C_1 superfamily		Protein similar to CwfJ C-terminus 1; This region is found in the N terminus of Schizosaccharomyces...	-	75.1015	2.97E-16	271 - 393	superfamily	252738

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44735	PHATRDRAFT_44735	185477	242929	Not available	Cre17.g741550.t1.2	AT1G56290.1	545481

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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