13175 COG4178
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
13175 chr_7 COG4178 121167 123840 + COG4178
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0075
Normalized Mean Residue
Thaps_bicluster_0155
0.30
(bd529) SNF2_N
0.9285
(bd624) Glyco_transf_34 superfamily
0.9263
(bd439) POLBc_alpha
0.9152
(bd718) PRK10387
0.9052
(bd843) NA
0.8976
hypothetical protein
0.8963
hypothetical protein
0.8925
ABC_ATPase superfamily
0.8915
hypothetical protein
0.8885
2A0109
0.8884
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCD_peroxisomal_ALDP ATP-binding cassette domain of peroxisomal transporter, subfamily D; Peroxisomal ATP-binding... cl17201 215.095 2.15E-65 474 - 688 specific 213190
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 215.095 2.15E-65 474 - 688 superfamily 266551
ABC_membrane_2 superfamily ABC transporter transmembrane region 2; This domain covers the transmembrane of a small family of... - 201.69 4.96E-59 117 - 398 superfamily 260492
COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function... - 486.817 2.22E-163 117 - 694 multi-dom 226646
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd415 Not available 227336 233241 Not available Cre01.g029250.t1.2 Not available 474156
KEGG description KEGG Pathway
Not available Not available
GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF
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