13887 HCO3_cotransp superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13887 chr_8 HCO3_cotransp superfamily 159663 161745 - HCO3_cotransp superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443457 Thaps13887.1, Thaps13887.2, Thaps13887.4, Thaps13887.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0044

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.8472

262908

DEAD
0.8372

40001

PRK05433
0.8365

21922

hypothetical protein
0.8294

263997

(APA1) Adaptin_N
0.8285

26874

CLPTM1 superfamily
0.8285

2253

hypothetical protein
0.8265

8438

hypothetical protein
0.821

13308

PLN02948
0.818

24106

hypothetical protein
0.8174

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HCO3_cotransp superfamily HCO3- transporter family; This family contains Band 3 anion exchange proteins that exchange CL-/... - 158.998 1.76E-42 9 - 450 superfamily 250251

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd52 PHATRDRAFT_bd52 248163 244187 440779 Cre10.g443900.t1.1 AT3G06450.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006820 GO:0015380 GO:0016021 -

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015380

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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