262555 AAT_I superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262555	chr_5	AAT_I superfamily	1391205	1392817	-	AAT_I superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450104	Thaps262555.3, Thaps262555.1, Thaps262555.2, Thaps262555.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0226

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0184	0.33	0.00067 4.8

Most Highly Correlated Transcripts

264548 FusA 0.9324	21706 S1_Rrp4 0.9283	22465 PTZ00169 0.9188	267979 HCO3_cotransp superfamily 0.9164	40798 IF4E 0.909	40200 TRX_reduct 0.9087
15114 Zinc_peptidase_like superfamily 0.9071	36007 Aldolase_II superfamily 0.907	270120 Uup 0.9061	22322 PHear_NECAP 0.9049

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	478.002	3.85E-165	15 - 494	superfamily	267298

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_26649	PHATRDRAFT_26649	223936	188091	428330	Cre12.g547750.t1.2	Not available	496419

KEGG

KEGG description	KEGG Pathway
Aminoacyl-tRNA biosynthesis	map00970

GO Terms

Not available -

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