15950 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15950 chr_17 Peptidase_A22B superfamily 189743 191040 + Peptidase_A22B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453131 Thaps15950.1, Thaps15950.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0291

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

22162

hypothetical protein
0.899

26031

SHMT
0.8858

20637

SNc
0.8804

9247

hypothetical protein
0.8724

bd258

(bd258) HU
0.8704

269662

Peptidase_M14_like superfamily
0.8656

6028

NA
0.8625

268443

SAICAR_synt_Sc
0.8617

bd1319

(bd1319) ycf16
0.8616

24601

CbiX_SirB_N
0.8584

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 222.217 4.16E-69 78 - 379 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14756 PHATRDRAFT_14756 227108 257895 467353 Cre07.g332550.t1.2 AT2G03120.1 546251

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 GO:0008717 GO:0004244 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0008717

NA

Details: 
NA
GO Category: 
NA

GO:0004244

NA

Details: 
NA
GO Category: 
NA

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