16169 TPP_E1_PDC_ADC_BCADC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16169 chr_6 TPP_E1_PDC_ADC_BCADC 840294 842459 - TPP_E1_PDC_ADC_BCADC

Synonyms

NCBI ID Ensembl Genomes exon ID
7448626 Thaps16169.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0239
 0.34

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9438

bd1403

(bd1403) NA
0.9333

bd1342

(bd1342) psaL
0.9276

bd2088

(bd2088) rbcL
0.9273

bd1863

(bd1863) NA
0.9196

bd1645

(bd1645) tpt
0.9164

bd1387

(bd1387) psbE
0.9126

bd1037

(bd1037) Ycf66_N
0.9099

bd1304

(bd1304) Ycf4
0.9069

bd718

(bd718) PRK10387
0.9044

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of... cl01629 251.646 3.23E-77 12 - 325 specific 238958
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 251.646 3.23E-77 12 - 325 superfamily 261022
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 134.143 4.49E-36 394 - 560 superfamily 264357
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 102.679 1.72E-25 589 - 701 superfamily 251527
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 102.679 1.72E-25 589 - 701 superfamily 251527
odpB pyruvate dehydrogenase E1 component beta subunit; Validated - 245.034 3.07E-74 394 - 718 multi-dom 177066

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016624 GO:0004739 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016624

oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
GO Category: 
MF

GO:0004739

pyruvate dehydrogenase (acetyl-transferring) activity

Details: 
Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
GO Category: 
MF

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