17208 CK_II_beta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17208 chr_20 CK_II_beta 553476 555584 + CK_II_beta

Synonyms

NCBI ID Ensembl Genomes exon ID
7447755 Thaps17208.1, Thaps17208.2, Thaps17208.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0471

Most Highly Correlated Transcripts

270222

0.877

37231

HECTc
0.8616

37118

FeThRed_B
0.8612

23834

hypothetical protein
0.8566

268443

SAICAR_synt_Sc
0.8557

24133

hypothetical protein
0.8525

2977

hypothetical protein
0.8521

262926

PLN02788
0.8507

32859

M18_DAP
0.8496

5101

UbiE
0.8476

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CK_II_beta Casein kinase II regulatory subunit; Casein kinase II regulatory subunit. cl02099 349.949 4.31E-117 426 - 609 specific 198153
CK_II_beta superfamily Casein kinase II regulatory subunit; Casein kinase II regulatory subunit. - 349.949 4.31E-117 426 - 609 superfamily 261175

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11285 PHATRDRAFT_11285 228778 317294 73613 Cre01.g016556.t1.1 AT5G47080.1 Not available

KEGG

KEGG description KEGG Pathway
Ribosome biogenesis in eukaryotes map03008

GO Terms

GO:0005956 GO:0008605 -

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008605

NA

Details: 
NA
GO Category: 
NA

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