23834 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23834 chr_8 hypothetical protein 984294 986745 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452875 Thaps23834.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0479

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0046
 0.42

Most Highly Correlated Transcripts

24519

hypothetical protein
0.9008

25233

hypothetical protein
0.8905

24523

hypothetical protein
0.8813

3617

SRPBCC superfamily
0.8762

2693

hypothetical protein
0.8705

37231

HECTc
0.8689

18392

RabGAP-TBC
0.8654

40200

TRX_reduct
0.8574

17208

CK_II_beta
0.8566

268443

SAICAR_synt_Sc
0.8542

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 326553 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008766 GO:0016881 GO:0018169 -

GO:0008766

UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.
GO Category: 
MF

GO:0016881

acid-amino acid ligase activity

Details: 
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

GO:0018169

ribosomal S6-glutamic acid ligase activity

Details: 
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
GO Category: 
MF

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