17880 HD_3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17880 chr_13 HD_3 862332 863114 - HD_3

Synonyms

NCBI ID Ensembl Genomes exon ID
7450511 Thaps17880.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0320

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9079

37100

Zn-ribbon_RPC11
0.8941

24619

2-Hacid_dh_1
0.8923

32314

LSm2
0.8915

6953

PRK11713
0.8874

2514

DnaJ
0.8834

36884

RimI
0.8826

36476

WD40 superfamily
0.8807

33995

DUF1077
0.8801

8397

hypothetical protein
0.88

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HD_3 HD domain; HD domains are metal dependent phosphohydrolases. cl17350 169.667 2.35E-52 75 - 225 specific 257465
HD_3 superfamily HD domain; HD domains are metal dependent phosphohydrolases. - 169.667 2.35E-52 75 - 225 superfamily 266640

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12451 PHATRDRAFT_12451 215693 264605 Not available Cre06.g265900.t1.2 AT1G26160.1 355070

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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