21069 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21069 chr_1 Mito_carr 2829874 2830929 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7446810 Thaps21069.1, Thaps21069.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0203

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0274
 0.39

Most Highly Correlated Transcripts

17214

PLN02512
0.9068

36037

Trypsin_2
0.904

29506

cpn10
0.8904

14192

PLN02449
0.8843

38306

Chloroa_b-bind
0.8823

36641

Aldolase_Class_I superfamily
0.8808

28635

hypothetical protein
0.873

31535

cyclophilin_ABH_like
0.8726

22213

(PFK2) PFK superfamily
0.8724

9459

Thioredoxin_like superfamily
0.8703

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 65.3483 6.76E-14 95 - 183 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 65.3483 6.76E-14 95 - 183 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 65.3483 6.76E-14 95 - 183 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 65.3483 6.76E-14 95 - 183 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49764 PHATRDRAFT_49764 245579 241061 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005215 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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