2131 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2131 chr_2 COG3899 250417 254636 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7442208 Thaps2131.2, Thaps2131.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425

Most Highly Correlated Transcripts

21090

hypothetical protein
0.8883

267979

HCO3_cotransp superfamily
0.881

268011

Peptidase_M8 superfamily
0.8644

23602

hypothetical protein
0.8629

38011

PKc_like superfamily
0.8616

264621

COG3899
0.8606

263866

AAK superfamily
0.8601

5256

hypothetical protein
0.8563

25005

hypothetical protein
0.8562

21220

KU superfamily
0.8547

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 86.3625 5.22E-19 371 - 565 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 86.3625 5.22E-19 371 - 565 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 239.607 1.11E-65 372 - 1165 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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