21374 LactonaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21374	chr_2	Lactonase	1530465	1531932	-	Lactonase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443067	Thaps21374.1, Thaps21374.3, Thaps21374.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0219

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0211	0.43	0.64 2

Most Highly Correlated Transcripts

36650 hypothetical protein 0.8425	269917 TrmA 0.7619	5236 DUF819 superfamily 0.761	2569 Methyltransf_32 superfamily 0.7387	bd1155 (bd1155) GCS superfamily 0.7279	42821 PRK14333 0.712
33425 BMS1 0.7091	21110 Sun 0.7045	24750 hypothetical protein 0.7016	37748 SpoVK 0.6987

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Lactonase		Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)...	-	154.298	5.22E-43	12 - 381	multi-dom	255877

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments