21640 Iso_dh superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21640 chr_3 Iso_dh superfamily 375479 377527 + Iso_dh superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441754 Thaps21640.2, Thaps21640.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0383

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

269160

(gltD) GltD
0.9307

22651

hypothetical protein
0.8986

268374

(PDHA1) TPP_E1_PDC_ADC_BCADC
0.8789

264364

PLN02929
0.8605

268280

(LAT2) PDHac_trf_mito
0.8486

264005

Glyco_hydrolase_16 superfamily
0.8434

41979

PRK06116
0.8407

7134

hypothetical protein
0.8392

31818

Mito_carr
0.8381

21554

hypothetical protein
0.8351

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Iso_dh superfamily - 613.964 84 - 489 superfamily 260425

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14762 PHATRDRAFT_14762 171507 294515 229382 Cre04.g214500.t1.1 AT5G14590.1 354100

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0005509 GO:0004448 GO:0004450 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0004448

isocitrate dehydrogenase activity

Details: 
Catalysis of the reaction: isocitrate + acceptor = 2-oxoglutarate + CO2 + reduced acceptor.
GO Category: 
MF

GO:0004450

isocitrate dehydrogenase (NADP+) activity

Details: 
Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+.
GO Category: 
MF

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