41979 PRK06116
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41979 chr_11a PRK06116 308948 310853 - PRK06116

Synonyms

NCBI ID Ensembl Genomes exon ID
7443289 Thaps41979.1, Thaps41979.2, Thaps41979.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

7134

hypothetical protein
0.9186

262433

Pumilio superfamily
0.9112

4350

hypothetical protein
0.8998

25330

hypothetical protein
0.8807

8586

DUF563
0.8794

268374

(PDHA1) TPP_E1_PDC_ADC_BCADC
0.8791

264005

Glyco_hydrolase_16 superfamily
0.8776

268280

(LAT2) PDHac_trf_mito
0.8736

268581

hypothetical protein
0.8734

24977

TRAUB superfamily
0.8718

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pyr_redox_dim superfamily Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class... - 142.316 2.51E-40 416 - 530 superfamily 251571
Pyr_redox_dim superfamily Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class... - 142.316 2.51E-40 416 - 530 superfamily 251571
Pyr_redox superfamily Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II... - 75.2875 1.31E-16 241 - 323 superfamily 249559
Pyr_redox superfamily Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II... - 75.2875 1.31E-16 241 - 323 superfamily 249559
PRK06116 glutathione reductase; Validated - 632.962 0 60 - 530 multi-dom 235701

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 166716 63987 Not available Not available 254571

KEGG

KEGG description KEGG Pathway
Glutathione metabolism map00480

GO Terms

GO:0006118 GO:0016491 GO:0050660 GO:0015036 GO:0005737 GO:0004362 GO:0006749 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0050660

flavin adenine dinucleotide binding

Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0004362

glutathione-disulfide reductase activity

Details: 
Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+.
GO Category: 
MF

GO:0006749

glutathione metabolic process

Details: 
The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.
GO Category: 
BP

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