21815 (AMS1) PLN02243
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21815 chr_3 (AMS1) PLN02243 1266204 1267712 - PLN02243

Synonyms

NCBI ID Ensembl Genomes exon ID
7441903 Thaps21815.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0209

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0246
 0.41

Most Highly Correlated Transcripts

bd1766

(bd1766) NA
0.8488

bd1866

(bd1866) NA
0.8423

644

(AK2) PTZ00247
0.8272

bd672

(bd672) NA
0.8199

28496

(AHC3) PRK05476
0.7982

3154

(Tp_HSF_1b) HSF_DNA-bind
0.7959

bd624

(bd624) Glyco_transf_34 superfamily
0.7924

25933

tpt
0.7866

8701

hypothetical protein
0.7809

264007

NAD_binding_10
0.779

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S-AdoMet_synt_C superfamily S-adenosylmethionine synthetase, C-terminal domain; The three domains of S-adenosylmethionine... - 209.956 7.95E-66 286 - 432 superfamily 111646
S-AdoMet_synt_N superfamily S-adenosylmethionine synthetase, N-terminal domain; The three domains of S-adenosylmethionine... - 174.2 1.13E-52 5 - 112 superfamily 249858
S-AdoMet_synt_N superfamily S-adenosylmethionine synthetase, N-terminal domain; The three domains of S-adenosylmethionine... - 174.2 1.13E-52 5 - 112 superfamily 249858
S-AdoMet_synt_M superfamily S-adenosylmethionine synthetase, central domain; The three domains of S-adenosylmethionine... - 159.515 6.21E-47 126 - 284 superfamily 251520
S-AdoMet_synt_M superfamily S-adenosylmethionine synthetase, central domain; The three domains of S-adenosylmethionine... - 159.515 6.21E-47 126 - 284 superfamily 251520
PLN02243 S-adenosylmethionine synthase - 638.405 0 4 - 437 multi-dom 177886

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271944 310664 198673 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004478 GO:0005524 GO:0006730 GO:0048269 GO:0048270 -

GO:0004478

methionine adenosyltransferase activity

Details: 
Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006730

one-carbon metabolic process

Details: 
The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.
GO Category: 
BP

GO:0048269

methionine adenosyltransferase complex

Details: 
A multimeric enzyme complex composed of variable numbers of catalytic alpha subunits, and noncatalytic beta subunits. The beta subunits are believed to have a regulatory function. The enzyme complex catalyzes the synthesis of S-adenosylmethionine (AdoMet), which is the major methyl group donor, participating in the methylation of proteins, DNA, RNA, phospholipids, and other small molecules.
GO Category: 
CC

GO:0048270

methionine adenosyltransferase regulator activity

Details: 
Modulates the activity of methionine adenosyltransferase.
GO Category: 
MF

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