2194 TDP2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2194 chr_2 TDP2 409788 411150 - TDP2

Synonyms

NCBI ID Ensembl Genomes exon ID
7442240 Thaps2194.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

bd1815

(bd1815) NA
0.8639

bd730

(bd730) NA
0.8426

6458

Ssu72 superfamily
0.8258

16114

PLN02350
0.8184

12899

AAA
0.8182

4350

hypothetical protein
0.8168

262521

WD40 superfamily
0.813

21955

hypothetical protein
0.8104

23469

Plus-3
0.8098

10142

Got1 superfamily
0.809

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TDP2 Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related... cl00490 204.885 1.66E-62 36 - 289 specific 197314
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 204.885 1.66E-62 36 - 289 superfamily 260458

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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