22031 Sin_N superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22031 chr_3 Sin_N superfamily 2317232 2318907 - Sin_N superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452752 Thaps22031.1, Thaps22031.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0070
 0.44

Most Highly Correlated Transcripts

12899

AAA
0.8978

33946

(Tp_CCHH3) SSL1
0.8926

267979

HCO3_cotransp superfamily
0.8881

6012

hypothetical protein
0.879

34303

TEF1
0.8761

3563

(Tp_CCCH2) WD40 superfamily
0.8734

35095

TPR
0.8729

17262

(OGG) ogg
0.8722

21654

hypothetical protein
0.8703

268443

SAICAR_synt_Sc
0.8673

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sin_N superfamily Sin-like protein conserved region; Family of higher eukaryotic proteins. SIN was identified as a... - 89.4177 1.68E-19 39 - 407 superfamily 252811

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_54175 PHATR_54175 248737 172068 Not available Cre10.g454650.t1.2 Not available 316675

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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