22716 TH1 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22716	chr_5	TH1 superfamily	1075141	1078993	+	TH1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449644	Thaps22716.6, Thaps22716.4, Thaps22716.1, Thaps22716.3, Thaps22716.2, Thaps22716.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0246

Most Highly Correlated Transcripts

262371 AAA_12 superfamily 0.9051	12899 AAA 0.9041	5760 SART-1 0.9018	22620 (Tp_AP2-EREBP1) regulator [Rayko] 0.9005	15114 Zinc_peptidase_like superfamily 0.898	1057 PIH1 superfamily 0.8975
7683 DUF3395 superfamily 0.8955	22603 COG3899 0.8948	268550 (ALD1) ALDH-SF superfamily 0.8947	23469 Plus-3 0.8946

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TH1 superfamily		TH1 protein; TH1 is a highly conserved but uncharacterized metazoan protein. No homologue has been...	-	105.423	1.10E-23	222 - 873	superfamily	252838

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	284807	Not available	Not available	Not available	497217

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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