2321 DnaQ_like_exo superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2321 chr_2 DnaQ_like_exo superfamily 713425 715656 + DnaQ_like_exo superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450203 Thaps2321.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0302

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0070
 0.44

Most Highly Correlated Transcripts

21568

hypothetical protein
0.8692

264498

PRK00142
0.8549

13308

PLN02948
0.8547

bd1959

(bd1959) NA
0.8526

1692

hypothetical protein
0.8519

261310

COG3349
0.8483

38469

WD40
0.8471

22753

hypothetical protein
0.8471

37928

PLN03238
0.8458

5797

ThTPase
0.8453

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 122.321 1.34E-31 260 - 470 superfamily 263941

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45692 PHATRDRAFT_45692 259762 185876 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0005622 GO:0008408 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0008408

3'-5' exonuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO Category: 
MF

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