23277 EEP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23277 chr_6 EEP superfamily 1726663 1729615 + EEP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444588 Thaps23277.2, Thaps23277.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0223

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0268
 0.24

Most Highly Correlated Transcripts

24878

COG0412
0.8918

21222

SrmB
0.8895

261145

Lactamase_B superfamily
0.8872

15992

COG0820
0.8872

32395

RNA_pol
0.8868

bd1807

(bd1807) RRS1 superfamily
0.8851

32158

NOC3
0.8828

262041

MIF4G
0.8818

22036

ElaC
0.8817

268744

SUA5
0.8796

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 105.078 1.73E-24 170 - 413 superfamily 260458

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48873 PHATRDRAFT_48873 136381 240109 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004518 GO:0016788 GO:0042578 -

GO:0004518

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

GO:0016788

hydrolase activity, acting on ester bonds

Details: 
Catalysis of the hydrolysis of any ester bond.
GO Category: 
MF

GO:0042578

phosphoric ester hydrolase activity

Details: 
Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
GO Category: 
MF

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