23490 Alpha_kinaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23490	chr_7	Alpha_kinase	1081416	1083513	-	Alpha_kinase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447069	Thaps23490.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0230

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0210	0.31	17000 2900

Most Highly Correlated Transcripts

32395 RNA_pol 0.9268	3315 hypothetical protein 0.9099	268136 COG1054 0.9075	25120 U3_assoc_6 superfamily 0.9072	21368 hypothetical protein 0.9032	23210 hypothetical protein 0.9028
8541 PRK00142 0.9008	13378 PRK13762 0.8965	22441 hypothetical protein 0.8949	20825 hypothetical protein 0.894

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_kinase		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	cl03728	132.44	2.26E-35	417 - 634	specific	251549
Alpha_kinase superfamily		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	-	132.44	2.26E-35	417 - 634	superfamily	261852

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	192727	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004674 GO:0005524 GO:0006468 -

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