23616 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23616 chr_7 Peptidase_A22B superfamily 1752735 1756010 + Peptidase_A22B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447189 Thaps23616.1, Thaps23616.2, Thaps23616.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0240
 0.25

Most Highly Correlated Transcripts

11615

PRK15061
0.9379

8303

Glyco_trans_1_2
0.9137

5638

hypothetical protein
0.911

24862

hypothetical protein
0.9107

262575

DHOD_1A_like
0.9088

3154

(Tp_HSF_1b) HSF_DNA-bind
0.9021

34810

Calreticulin
0.9014

35518

(GYK) PLN02295
0.9001

1417

GpcrRhopsn4 superfamily
0.8982

1553

PKc_like superfamily
0.8946

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 192.942 3.71E-55 539 - 886 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 458001 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008233 GO:0016021 GO:0008717 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008233

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0008717

NA

Details: 
NA
GO Category: 
NA

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