23622 RhaT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23622 chr_7 RhaT 1801993 1803918 + RhaT

Synonyms

NCBI ID Ensembl Genomes exon ID
7450600 Thaps23622.2, Thaps23622.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0097
 0.39

Most Highly Correlated Transcripts

13308

PLN02948
0.8895

12899

AAA
0.854

268443

SAICAR_synt_Sc
0.8498

267979

HCO3_cotransp superfamily
0.8357

25011

hypothetical protein
0.8329

900

POP1 superfamily
0.8311

4372

hypothetical protein
0.8309

6389

PDCD2_C superfamily
0.8255

268010

(RPC2) PRK08565
0.8239

1907

hypothetical protein
0.8233

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and... - 65.2729 5.42E-12 196 - 508 multi-dom 223769

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49268 PHATRDRAFT_49268 209199 311457 201061 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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