23707 SYLF superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23707	chr_8	SYLF superfamily	304033	308930	+	SYLF superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445545	Thaps23707.4, Thaps23707.5, Thaps23707.1, Thaps23707.3, Thaps23707.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0095

Most Highly Correlated Transcripts

22533 hypothetical protein 0.8675	263997 (APA1) Adaptin_N 0.8669	25480 (Tp_Myb2R8) regulator [Rayko] 0.8639	22898 hypothetical protein 0.8624	2653 CH 0.8562	5273 DUF221 superfamily 0.8456
bd1192 (bd1192) Acyl_ACP_Desat 0.8454	20615 hypothetical protein 0.8442	7695 SPRY_RanBP_like 0.8429	20921 S2P-M50_like_2 0.8411

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SYLF superfamily		The SYLF domain (also called DUF500), a novel lipid-binding module; The SYLF domain is named after...	-	157.423	6.05E-43	444 - 721	superfamily	260792

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44183	PHATR_44183	252604	242604	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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