23795 SGT1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23795 chr_8 SGT1 superfamily 793059 795997 + SGT1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452839 Thaps23795.1, Thaps23795.3, Thaps23795.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Most Highly Correlated Transcripts

7066

hypothetical protein
0.8823

264748

PKc_like superfamily
0.8713

21355

hypothetical protein
0.8623

1615

hypothetical protein
0.8602

23601

hypothetical protein
0.8596

269893

TOPRIM_DnaG_primases
0.8589

42740

deoxycytidylate_deaminase
0.8561

12836

EEP superfamily
0.8558

5690

YdcF-like
0.8556

12899

AAA
0.8555

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SGT1 superfamily SGT1 protein; This family consists of several eukaryotic SGT1 proteins. Human SGT1 or hSGT1 is... - 102.49 6.94E-23 134 - 868 superfamily 254052

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 234931 322256 Not available Not available AT5G65490.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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