24372 PqiA superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24372	chr_11a	PqiA superfamily	647317	652081	+	PqiA superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445397	Thaps24372.4, Thaps24372.3, Thaps24372.2, Thaps24372.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0010	0.38	14000000 370

Most Highly Correlated Transcripts

11664 DUF3510 0.8748	8885 DUF3510 0.8702	23586 hypothetical protein 0.8646	25565 hypothetical protein 0.8645	22549 hypothetical protein 0.8619	29322 AAT_I superfamily 0.8589
1197 RhaT 0.8585	4482 hypothetical protein 0.8576	21092 hypothetical protein 0.8569	25678 hypothetical protein 0.8509

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PqiA superfamily		Paraquat-inducible protein A; Paraquat is a superoxide radical-generating agent. The promoter for...	-	64.4599	1.17E-11	998 - 1158	superfamily	252573

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45870	PHATRDRAFT_45870	245256	325071	457684	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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