24534 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24534 chr_12 hypothetical protein 771524 772753 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7447993 Thaps24534.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0424

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0243
 0.36

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9135

bd1841

(bd1841) CAP10 superfamily
0.9123

bd415

(bd415) arom_aa_hydroxylase superfamily
0.908

23827

N_Asn_amidohyd superfamily
0.8995

bd1808

(bd1808) NA
0.8879

25495

ALDH_F6_MMSDH
0.8876

32067

PTZ00182
0.8873

bd884

(bd884) NA
0.8861

269513

PTZ00461
0.8802

bd1941

(bd1941) NA
0.88

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34003 PHATRDRAFT_34003 235176 326132 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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