25263 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25263 chr_17 Patatin_and_cPLA2 superfamily 347176 349996 + Patatin_and_cPLA2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442114 Thaps25263.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0193

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0194
 0.41

Most Highly Correlated Transcripts

3331

Bac_rhamnosid superfamily
0.888

25168

hypothetical protein
0.8874

264064

SbcC
0.887

23130

NT_PAP_TUTase
0.8843

10450

hypothetical protein
0.8738

263483

CHD
0.8696

5788

TFIIS_M
0.8612

20796

Sec23_helical
0.8576

264081

YSH1
0.8561

bd1815

(bd1815) NA
0.8559

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 73.5339 1.29E-14 568 - 758 superfamily 264349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 236259 303314 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0045735 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0045735

nutrient reservoir activity

Details: 
Functions in the storage of nutritious substrates.
GO Category: 
MF

Add comment

Log in to post comments